dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000644_17|CGC1
Gene ID: MGYG000000644_00963
Location and strand information: 25949 - 27697 (-)
Family: GH43_12|GH43
Protein type: CAZyme
Protein description: Non-reducing end alpha-L-arabinofuranosidase BoGH43A
Protein isoelectric point: 8.7369
Protein molecular weight: 64779.7
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000644_17|CGC1
Gene ID: MGYG000000644_00964
Location and strand information: 27893 - 31951 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000000644_17|CGC1
Gene ID: MGYG000000644_00965
Location and strand information: 32435 - 33829 (+)
Family: GH5_21
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.7298
Protein molecular weight: 53222.32
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000644_17|CGC1
Gene ID: MGYG000000644_00966
Location and strand information: 33957 - 37130 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000000644_17|CGC1
Gene ID: MGYG000000644_00967
Location and strand information: 37195 - 39069 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000644_17|CGC1
Gene ID: MGYG000000644_00968
Location and strand information: 39118 - 41946 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000644_17|CGC1
Gene ID: MGYG000000644_00969
Location and strand information: 41981 - 43789 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000644_17|CGC1
Gene ID: MGYG000000644_00970
Location and strand information: 43831 - 44844 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000644_17|CGC1
Gene ID: MGYG000000644_00971
Location and strand information: 44881 - 47028 (+)
Family: GH10|CBM4
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.5306
Protein molecular weight: 79954.16
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000000644_00963	GH43_e50\|3.2.1.55	xylan
MGYG000000644_00965
MGYG000000644_00971	GH10_e9\|CBM4_e10\|3.2.1.8	xylan

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is xylan

Substrate predicted by dbCAN-PUL is xylan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000644_00963	Non-reducing end alpha-L-arabinofuranosidase BoGH43A	CAZyme	25949	27697	-	GH43_12\| GH43
MGYG000000644_00964	Sensor histidine kinase RcsC	TF	27893	31951	-	HTH_AraC+HTH_AraC
MGYG000000644_00965	hypothetical protein	CAZyme	32435	33829	+	GH5_21
MGYG000000644_00966	TonB-dependent receptor SusC	TC	33957	37130	+	1.B.14.6.1
MGYG000000644_00967	hypothetical protein	null	37195	39069	+	SusD-like_3\| SusD_RagB
MGYG000000644_00968	hypothetical protein	TC	39118	41946	+	1.B.14.6.1
MGYG000000644_00969	hypothetical protein	null	41981	43789	+	SusD-like_3\| SusD_RagB
MGYG000000644_00970	hypothetical protein	null	43831	44844	+	DUF1735
MGYG000000644_00971	hypothetical protein	CAZyme	44881	47028	+	GH10\| CBM4
Protein ID	Protein Name	Type	Start	End	Strand	Signature